Adhyaru et al., 2016
D.N. Adhyaru, N.S. Bhatt, H.A. Modi, J. Divecha
Insight on xylanase from Aspergillus tubingensis FDHN1: Production, high yielding recovery optimization through statistical approach and application
Biocatalysis and Agricultural Biotechnology, 6 (2016), pp. 51-57

Afrisham et al., 2016
S. Afrisham, A. Badoei-Dalfard, A. Namaki-Shoushtari, Z. Karami
Characterization of a thermostable, CaCl2-activated and raw-starch hydrolyzing alpha-amylase from Bacillus licheniformis AT70: Production under solid state fermentation by utilizing agricultural wastes
Journal of Molecular Catalysis B: Enzymatic, 132 (2016), pp. 98-106

Ali et al., 2016
S.R. Ali, Z. Anwar, M. Irshad, S. Mukhtar, N.T. Warraich
Bio-synthesis of citric acid from single and co-culture-based fermentation technology using agro-wastes
Journal of Radiation Research and Applied Sciences, 9 (2016), pp. 57-62

Alitalo et al., 2016
Alitalo, A., Aura, E., & Niskanen, M. (2016). Bioreactor and fermentation process for producing hydrogen. PCT Patent Application WO2016097478, 23 Jun 2016.

Ambye-Jensen et al., 2013
M. Ambye-Jensen, K.S. Johansen, T. Didion, Z. Kadar, J.E. Schmidt, A.S. Meyer
Ensiling as biological pretreatment of grass (Festulolium Hykor): The effect of composition, dry matter, and inocula on cellulose convertibility
Biomass and Bioenergy, 58 (2013), pp. 303-312

Ang et al., 2013
S.K. Ang, E.M. Shaza, Y. Adibah, A.A. Suraini, M.S. Madihah
Production of cellulases and xylanase by Aspergillus fumigatus SK1 using untreated oil palm trunk through solid state fermentation
Process Biochemistry, 48 (2013), pp. 1293-1302

Ano et al., 2016
Y. Ano, A. Hoshi, T. Kutsukake, H. Nakayama
Neuroprotective effects of dehydroergosterol identified in Camembert cheese via suppression of microglial inflammation
Alzheimer's & Dementia, 12 (7) (2016), p. 863

Ao et al., 2009
Ao, Z., Shen, C., Shui, L., Wang, Q., Xu, D., Yi, B., et al. (2009). Method for producing aroma type customized wine. Chinese Patent Application CN101457189, 17 Jun 2009.

Bal et al., 2016
J. Bal, S.-H. Yun, S.-H. Yeo, J.-M. Kim, D.-H. Kim
Metagenomic analysis of fungal diversity in Korean traditional wheat-based fermentation starter nuruk
Food Microbiology, 60 (2016), pp. 73-83

Bassi et al., 2015
D. Bassi, E. Puglisi, S. Cocconcelli
Comparing natural and selected starter cultures in meat and cheese fermentations
Current Opinion in Food Science, 2 (2015), pp. 118-122

Bansal et al., 2012
N. Bansal, R. Tewari, R. Soni, S.K. Soni
Production of cellulases from Aspergillus niger NS-2 in solid state fermentation on agricultural and kitchen waste residues
Waste Management, 32 (2012), pp. 1341-1346

Berka and Cherry, 2005
Berka, R., & Cherry, J. (2005). Methods for converting plant cell wall polysaccharides. US Patent Application US2005233423, 20 Oct. 2005.

Bhattacharyya et al., 2008
B.C. Bhattacharyya, S. Banerjee, T.K. Ghosh
Bioreactors: functions in fermentation processes
A. Pandey, C. Larroche, C.R. Soccol, C.G. Dussap (Eds.), Advances in Fermentation Technology, Asiatech Publishers, New Delhi (2008), pp. 172-201

Bhattacharya et al., 2011
S.S. Bhattacharya, V.K. Garlapati, R. Banerjee
Optimization of laccase production using response surface methodology coupled with differential evolution
New Biotechnology, 28 (2011), pp. 31-39

Biz et al., 2016
A. Biz, A.T.J. Finkler, L.O. Pitol, B.S. Medina, N. Krieger, D.A. Mitchell
Production of pectinases by solid-state fermentation of a mixture of citrus waste and sugarcane bagasse in a pilot-scale packed-bed bioreactor
Biochemical Engineering Journal, 111 (2016), pp. 54-62

Boerge and Lena, 2007
Boerge, H. C., & Lena, H. C. (2007). Method and apparatus for conversion of cellulosic material to ethanol. PCT Patent Application WO2007009463, 25 Jan 2007.

Brown et al., 2005
Brown, K., Harris, P., Zaretsky, E., Rey, E., Vlasenko, E., Mcfarland, K., et al. (2005). Polypeptides having cellulolytic enhancing activity and polynucleotides encoding same. PCT Patent Application WO2005074647, 18 Aug. 2005.

Cabana et al., 2007
H. Cabana, J.P. Jones, S.N. Agathos
Preparation and characterization of cross-linked laccase aggregates and their application to the elimination of endocrine disrupting chemicals
Journal of Biotechnology, 132 (2007), pp. 23-31

Cao, 2014
Cao, S. (2014). Preparation method of dried mushroom-sticky rice vinegar. Chinese Patent Application CN103695284, 02 Apr 2014.

Castro et al., 2015
R.J.S. Castro, A. Ohara, T.G. Nishide, M.P. Bagagli, F.F.G. Dias, H.H. Sato
A versatile system based on substrate formulation using agroindustrial wastes for protease production by Aspergillus niger under solid state fermentation
Biocatalysis and Agricultural Biotechnology, 4 (2015), pp. 678-684

Cerda et al., 2016
A. Cerda, M. El-Bakry, T. Gea, A. Sánchez
Long term enhanced solid-state fermentation: Inoculation strategies for amylase production from soy and bread wastes by Thermomyces sp. in a sequential batch operation
Journal of Environmental Chemical Engineering, 4 (2016), pp. 2394-2401

Certík et al., 2013
M. Certík, Z. Adamechová, L. Guothová
Simultaneous enrichment of cereals with polyunsaturated fatty acids and pigments by fungal solid state fermentations
Journal of Biotechnology, 168 (2013), pp. 130-134

Chancharoonpong et al., 2012
C. Chancharoonpong, P.C. Hsieh, S.C. Sheu
Effect of different combinations of soybean and wheat bran on enzyme production from Aspergillus oryzae S
APCBEE Procedia, 2 (2012), pp. 68-72

Chanwicha et al., 2015
N. Chanwicha, S. Katekaew, T. Aimi, S. Boonlue
Purification and characterization of alkaline xylanase from Thermoascus aurantiacus var. levisporus KKU-PN-I2-1 cultivated by solid-state fermentation
Mycoscience, 56 (2015), pp. 309-318

Chen et al., 2014
B. Chen, Q. Wu, Y. Xu
Filamentous fungal diversity and community structure associated with the solid state fermentation of Chinese Maotai-flavor liquor
International Journal of Food Microbiology, 179 (2014), pp. 80-84

Chen and Zhuang, 2008
Chen, S., & Zhuang, J. (2008). Cereal solid-state fermentation Chinese caterpillar fungus and ganoderma lucidum product, and preparing method thereof. Chinese Patent Application CN101171968, 07 May 2008.

Cheng et al., 2012
S.S. Cheng, Y.C. Chao, S.C. Wong, C.C. Chen, K.H. Yang, Y.F. Yang
Study on hydrogen production potential utilizing leachate from aerobic bio-leaching bed fed with napiergrass and kitchen waste
Energy Procedia, 29 (2012), pp. 72-81

Cheng et al., 2016a
Cheng, J., Cheng, S., He, L., Yang, H., Wei, H., Hu, Z., et al. (2016a). Composition obtained by fermenting tetrastigma hemsleyanum diels et gilg. through edible and medicinal fungi and preparation method of composition. Chinese Patent Application CN105559068, 11 May 2016.

Cheng et al., 2016b
Cheng, J., Fu, L., He, L., Li, H., Wei, H., Hu, Z., et al. (2016b). Inonotus obliquus fermentation culture composition and preparation method thereof. Chinese Patent Application CN105535035, 04 May 2016.

Das et al., 2015
R.K. Das, S.K. Brar, M. Verma
A fermentative approach towards optimizing directed biosynthesis of fumaric acid by Rhizopus oryzae 1526 utilizing apple industry waste biomass
Fungal Biology, 119 (2015), pp. 1279-1290

Das et al., 2016
R.K. Das, S.K. Brar, M. Verma
Potential use of pulp and paper solid waste for the bio-production of fumaric acid through submerged and solid state fermentation
Journal of Cleaner Production, 112 (2016), pp. 4435-4444

Dhillon et al., 2012a
G.S. Dhillon, S.K. Brar, S. Kaur, S. Metahni, N. M’hamdi
Lactoserum as a moistening medium and crude inducer for fungal cellulase and hemicellulase induction through solid-state fermentation of apple pomace
Biomass and Bioenergy, 41 (2012), pp. 165-174

Dhillon et al., 2012c
G.S. Dhillon, S. Kaur, S.K. Brar
In-vitro decolorization of recalcitrant dyes through an ecofriendly approach using laccase from Trametes versicolor grown on brewer's spent grain
International Biodeterioration & Biodegradation, 72 (2012), pp. 67-75

Dhillon et al., 2012b
G.S. Dhillon, S. Kaur, S.K. Brar, M. Verma
Potential of apple pomace as a solid substrate for fungal cellulase and hemicellulase bioproduction through solid-state fermentation
Industrial Crops and Products, 38 (2012), pp. 6-13

Dhillon et al., 2013
G.S. Dhillon, S. Kaur, S.J. Sarma, S.K. Brar
Integrated process or fungal citric acid fermentation using apple processing wastes and sequential extraction of chitosan from waste stream
Industrial Crops and Products, 50 (2013), pp. 346-351

Dhillon et al., 2016
Dhillon, G. S., Rosine, G. M. L., Kaur, S., Hegde, K., Brar, S.K., Drogui, P., et al. Novel biomaterials from citric acid fermentation as biosorbents for removal of metals from waste chromated copper arsenate wood leachates. International Biodeterioration & Biodegradation (in press, Corrected Proof, Available online 20 September 2016).

Du et al., 2009
Du, W., Wang, J., Wang, Y., Xu, J., & Zhao, Y. (2009). Combined anaerobic fermentation process for organic solid wastes. Chinese Patent Application CN101337838, 07 Jan 2009.

Durand, 2003
A. Durand
Bioreactor designs for solid state fermentation
Biochemical Engineering Journal, 363 (2003), pp. 1-13

Dursun and Dalgıç, 2016
D. Dursun, A.C. Dalgıç
Optimization of astaxanthin pigment bioprocessing by four different yeast species using wheat wastes
Biocatalysis and Agricultural Biotechnology, 7 (2016), pp. 1-6

El-Batal et al., 2015
A.I. El-Batal, N.M. ElKenawy, A.S. Yassin, M.A. Amin
Laccase production by Pleurotus ostreatus and its application in synthesis of gold nanoparticles
Biotechnology Reports, 5 (2015), pp. 31-39

Eryılmaz et al., 2016
E.B. Eryılmaz, D. Dursun, A.C. Dalgıç
Multiple optimization and statistical evaluation of astaxanthin production utilizing olive pomace
Biocatalysis and Agricultural Biotechnology, 7 (2016), pp. 224-227

Farinas, 2015
C.S. Farinas
Developments in solid-state fermentation for the production of biomass degrading enzymes for the bioenergy sector
Renewable and Sustainable Energy Reviews, 52 (2015), pp. 179-188

Fdez-Güelfo et al., 2012
L.A. Fdez-Güelfo, C. Álvarez-Gallego, D. Sales, L.I.R. García
Dry-thermophilic anaerobic digestion of organic fraction of municipal solid waste: Methane production modeling
Waste Management, 32 (2012), pp. 382-388

Felder et al., 2012
D. Felder, D. Burns, D. Chang
Defining microbial terroir: The use of native fungi for the study of traditional fermentative processes
International Journal of Gastronomy and Food Science, 1 (2012), pp. 64-69

Feng et al., 2014
Y. Feng, Z. Chen, N. Liu, H. Zhao, C. Cui, M. Zhao
Changes in fatty acid composition and lipid profile during koji fermentation and their relationships with soy sauce flavor
Food Chemistry, 158 (2014), pp. 438-444

Feng, 2016
Feng, Y. (2016). Brewing method of fragrant and sweet osmanthus-flavored wine. Chinese Patent Application CN105462768, 06 Apr 2016.

Fernández-Fernández et al., 2013
M. Fernández-Fernández, M.Á. Sanromán, D. Moldes
Recent developments and applications of immobilized laccase
Biotechnology Advances, 31 (2013), pp. 1808-1825

Ferrarezi et al., 2014
A.L. Ferrarezi, T.H.K. Ohe, J.P. Borges, R.R. Brito, M.R. Siqueira, P.H. Vendramini, et al.
Production and characterization of lipases and immobilization of whole cell of the thermophilic Thermomucor indicae seudaticae N31 for transesterification reaction
Journal of Molecular Catalysis B: Enzymatic, 107 (2014), pp. 106-113

Ferreira da Costa et al., 2016
E.S. Ferreira da Costa, F.T. Soccol, C.R. Soccol
Patents on biofuels
C.R. Soccol, S.K. Brar, C. Faulds, L.P. Ramos (Eds.), Green fuels technology: Biofuels, Springer International Publishing, Switzerland (2016), pp. 501-523

Fonseca et al., 2014
M.I. Fonseca, J.I. Fariña, M.L. Castrillo, M.D. Rodríguez, C.E. Nuñez, L.L. Villalba, et al.
Biopulping of wood chips with Phlebia brevispora BAFC 633 reduces lignin content and improves pulp quality
International Biodeterioration and Biodegradation, 90 (2014), pp. 29-35

Font et al., 2003
X. Font, G. Caminal, X. Gabarrell, S. Romero, M.T. Vicent
Black liquor detoxification by laccase of Trametes versicolor pellets
Journal of Chemical Technology and Biotechnology, 78 (5) (2003), pp. 548-554

Franco et al., 2016
R.T. Franco, P. Buffiere, R. Bayard
Ensiling for biogas production: Critical parameters. A review
Biomass and Bioenergy, 94 (2016), pp. 94-104

Freitas et al., 2015
A.C. Freitas, F.C.F. Baleeiro, R.F. Fonseca, V. Bertucci Neto, G.A.S. Pinto, C.S. Farinas
Bioprocess development to add value to canola cake used as substrate for proteolytic enzyme production
Food and Bioproducts Processing, 95 (2015), pp. 173-182

Fukuyama et al., 2006
Fukuyama, S., Matsui, T., Soong, C., Allain, E., Vikso-Nielsen, A., Udagawa, H., et al. (2006). Enzymes for starch processing. PCT Patent Application WO2006069290, 29 Jun 2006.

Furukawa et al., 2013
S. Furukawa, T. Watanabe, H. Toyama, Y. Morinaga
Significance of microbial symbiotic coexistence in traditional fermentation
Journal of Bioscience and Bioengineering, 116 (2013), pp. 533-539

Galhaup et al., 2002
C. Galhaup, S. Goller, C.K. Peterbauer, J. Strauss, D. Haltrich
Characterization of the major laccase isoenzyme from Trametes pubescens and regulation of its synthesis by metal ions
Microbiology, 148 (2002), pp. 2159-2169

Galli et al., 2016
B.D. Galli, J.G.P. Martin, P.P.M. da Silva, E. Porto, M.H.F. Spoto
Sensory quality of Camembert-type cheese: Relationship between starter cultures and ripening molds
International Journal of Food Microbiology, 234 (2016), pp. 71-75

Gao et al., 2013
Gao, X., Lu, J., & Yan, S. (2013). Aspergillus oryzae and application method thereof in preparing sauce fragrant flavor material. Chinese Patent Application CN102787079, 21 Nov 2012.

Garai and Kumar, 2013
D. Garai, V. Kumar
A Box–Behnken design approach for the production of xylanase by Aspergillus candidus under solid state fermentation and its application in saccharification of agro residues and Parthenium hysterophorus L
Industrial Crops and Products, 44 (2013), pp. 352-363

Giri et al., 2011
A. Giri, K. Osako, A. Okamoto, E. Okazaki, T. Ohshima
Antioxidative properties of aqueous and aroma extracts of squid miso prepared with Aspergillus oryzae-inoculated koji
Food Research International, 44 (2011), pp. 317-325

Gkatzionis et al., 2014
K. Gkatzionis, D. Yunita, R.S.T. Linforth, M. Dickinson, C.E.R. Dodd
Diversity and activities of yeasts from different parts of a Stilton cheese
International Journal of Food Microbiology, 177 (2014), pp. 109-116

Godoy et al., 2011
M.G. Godoy, M.L.E. Gutarra, A.M. Castro, O.L.T. Machado, D.M.G. Freire
Adding value to a toxic residue from the biodiesel industry: Production of two distinct pool of lipases from Penicillium simplicissimum in castor bean waste
Journal of Industrial Microbiology and Biotechnology, 38 (2011), pp. 945-953

Gorwalla and Kulkarni, 2010
Gorwalla, E. P., & Kulkarni, S. N. (2010). Stacked basket bioreactor for solid state fermentation. PCT Patent Application WO2010032260, 25 Mar 2010.

Gowdhaman et al., 2014
D. Gowdhaman, V.S. Manaswini, V. Jayanthi, M. Dhanasri, G. Jeyalakshmi, V. Gunasekar, et al.
Xylanase production from Bacillus aerophilus KGJ2 and its application in xylooligosaccharides preparation
International Journal of Biological Macromolecules, 64 (2014), pp. 90-98

Grujic et al., 2015
M. Grujic, B. Dojnov, I. Potocnik, B. Duduk, Z. Vujci
Spent mushroom compost as substrate for the production of industrially important hydrolytic enzymes by fungi Trichoderma spp. and Aspergillus niger in solid state fermentation
International Biodeterioration & Biodegradation, 104 (2015), pp. 290-298

Hailei et al., 2013
W. Hailei, T. Chaozhi, Y. Guangli, L. Ping
A novel membrane-surface liquid co-culture to improve the production of laccase from Ganoderma lucidum
Biochemical Engineering Journal, 80 (2013), pp. 27-36

Haque et al., 2016
M.A. Haque, V. Kachrimanidou, A. Koutinas, C.S.K. Lin
Valorization of bakery waste for biocolorant and enzyme production by Monascus purpureus
Journal of Biotechnology, 231 (2016), pp. 55-64

Hashizume et al., 2013
K. Hashizume, T. Ito, T. Ishizuka, N. Takeda
Formation of ethyl ferulate by rice koji enzyme in sake and mirin mash conditions
Journal of Bioscience and Bioengineering, 116 (2) (2013), pp. 209-213

Hoelker et al., 2004
Hoelker, U., Janssen, M., & Lenz, J. (2004). Directed selective solid-phase culturing of stable microbial mixed populations for the continuous preparation of defined enzyme and metabolite mixtures. PCT Patent Application WO2004113490, 29 Dec 2004.

Hou et al., 2016
Hou, Z., Ma, Y., Ren, L., Tong, J., Tian, A., Hou, M., et al. (2016). Biomass continuous fermentation system. Chinese Patent Application CN105602841, 25 May 2016.

Hu et al., 2016
Hu, Y., Li, D., Li, W., Wang, C., Shi, Y., Xu, N., et al. (2016). Garlic juice and mulberry vinegar. Chinese Patent Application CN105567544, 11 May 2016.

Huang et al., 2009
Huang, J., Ji, L., Li, P., & Wang, S. (2009). Method for preparing spirit flavoring wine or spirit flavour liquid mainly with fragrance. Chinese Patent Application CN101457190, 17 Jun 2009.

Huang et al., 2010
Huang, T. T., Kelley, A., Mclaughlin, J., Juan, T. T., Aaron, K., John, M., et al. (2010). Fermentation broth formulations. PCT Patent Applications WO2010096673, 26 Aug 2010.

Huang et al., 2011
Y.-H. Huang, Y.-J. Lai, C.-C. Chou
Fermentation temperature affects the antioxidant activity of the enzyme-ripened sufu, an oriental traditional fermented product of soybean
Journal of Bioscience and Bioengineering, 112 (1) (2011), pp. 49-53

Hyeon et al., 2014
J.E. Hyeon, S.K. You, D.H. Kang, S.-H. Ryu, M. Kim, S.-S. Lee, et al.
Enzymatic degradation of lignocellulosic biomass by continuous process using laccase and cellulases with the aid of scaffoldin for ethanol production
Process Biochemistry, 49 (2014), pp. 1266-1273

Iizuka-Furukawa et al., 2016
S. Iizuka-Furukawa, A. Isogai, K. Kusaka, T. Fujii, Y. Wakai
Identification of 4-mercapto-4-methylpentan-2-one as the characteristic aroma of sake made from low-glutelin rice
Journal of Bioscience and Bioengineering, 123 (2017), pp. 209-215

Inoue et al., 2016
Y. Inoue, S. Kato, M. Saikusa, C. Suzuki, Y. Otsubo, Y. Tanaka, et al.
Analysis of the cooked aroma and odorants that contribute to umami soy miso (Japanese soybean paste)
Food Chemistry, 213 (2016), pp. 521-552

Irfan et al., 2014
M. Irfan, M. Nadeem, Q. Syed
One-factor-at-a-time (OFAT) optimization of xylanase production from Trichoderma viride-IR05 in solid-state fermentation
Journal of Radiation Research and Applied Sciences, 7 (2014), pp. 317-326

Ito et al., 2014
T. Ito, N. Suzuki, A. Nakayama, M. Ito, K. Hashizume
Factors affecting phenolic acid liberation from rice grains in the sake brewing process
Journal of Bioscience and Bioengineering, 118 (2014), pp. 640-645

Jao et al., 2011
C.-L. Jao, W.-C. Ko, K.-C. Hsu
Studies on the cooking conditions and mechanical koji making of black beans
Procedia Food Science, 1 (2011), pp. 1388-1395

Jiang et al., 2011
Jiang, P., Wang, Y., Jiang, J., & Zhu, Y. (2011). Method for producing cordyceps militaris fermentation rice by utilizing solid state fermentation of rice. Chinese Patent Application CN102172273, 07 Sep 2011.

Joshi et al., 2011
C. Joshi, P. Mathur, S.K. Khare
Degradation of phorbol esters by Pseudomonas aeruginosa PseA during solid-state fermentation of deoiled Jatropha curcas seed cake
Bioresource Technology, 102 (2011), pp. 4815-4819

Kapilan and Arasaratnam, 2011
R. Kapilan, V. Arasaratnam
Paddy husk as support for solid state fermentation to produce xylanase from Bacillus pumilus
Rice Science, 18 (2011), pp. 36-45

Kawauchi and Iwashita, 2014
M. Kawauchi, K. Iwashita
Functional analysis of histone deacetylase and its role in stress response drug resistance and solid-state cultivation in Aspergillus oryzae
Journal of Bioscience and Bioengineering, 118 (2) (2014), pp. 172-176

Karp et al., 2012
S.G. Karp, V. Faraco, A. Amore, L. Birolo, C. Giangrande, V.T. Soccol, et al.
Characterization of laccase isoforms produced by Pleurotus ostreatus in solid state fermentation of sugarcane bagasse
Bioresource Technology, 114 (2012), pp. 735-739

Kaur et al., 2012
S. Kaur, G.S. Dhillon, S.K. Brar, V.B. Chauhan
Carbohydrate degrading enzyme production by plant pathogenic mycelia and microsclerotia isolates of Macrophomina phaseolina through koji fermentation
Industrial Crops and Products, 36 (2012), pp. 140-148

Kaushik et al., 2014
P. Kaushik, A. Mishra, A. Malik
Dual application of agricultural residues for xylanase production and dye removal through solid state fermentation
International Biodeterioration & Biodegradation, 96 (2014), pp. 1-8

Kholif et al., 2016
A.E. Kholif, M.M.Y. Elghandour, G.B. Rodríguez, O.A. Olafadehan, A.Z.M. Salem
Anaerobic ensiling of raw agricultural waste with a fibrolytic enzyme cocktail as a cleaner and sustainable biological product
Journal of Cleaner Production (2016), 10.1016/j.jclepro.2016.11.012
(in press)

Kim et al., 2015
S.A. Kim, S.J. Yun, S.H. Jeon, N.H. Kim, H.W. Kim, T.J. Cho, et al.
Microbial composition of turbid rice wine (Makgeolli) at different stages of production in a real processing line
Food Control, 53 (2015), pp. 1-8

Kim et al., 2016
Kim, S. B., Liu, Y., & Zhang, L. (2016). Novel solid state fermentation device. Chinese Patent Application CN205099673, 23 Mar 2016.

Koroleva et al., 2002
O.V. Koroleva, V.P. Gavrilova, E.V. Stepanova, V.I. Lebedeva, N.I. Sverdlova, E.O. Landesman, et al.
Production of lignin modifying enzymes by co-cultivated white-rot fungi Cerrena maxima and Coriolus hirsutus and characterization of laccase from Cerrena maxima
Enzyme and Microbial Technology, 30 (2002), pp. 573-580

Krogh and Harris, 2007
Krogh, K., & Harris, P. (2007). Polypeptides having beta-glucosidase activity and polynucleotide encoding same. PCT Patent Application WO2007019442, 15 Feb 2007.

Kuhad et al., 2016
R.C. Kuhad, D. Deswal, S. Sharma, A. Bhattacharya, K.K. Jain, A. Kaur, et al.
Revisiting cellulase production and redefining current strategies based on major challenges
Renewable and Sustainable Energy Reviews, 55 (2016), pp. 249-272

Kumar et al., 2011
M. Kumar, A. Joshi, R. Kashyap, S. Khanna
Production of xylanase by Promicromonospora sp MARS with rice straw under non sterile conditions
Process Biochemistry, 46 (2011), pp. 1614-1618

Lai et al., 2016
Lai, H., Xue, Q., & Yang, B. (2016). Microbial agent production line. Chinese Patent Application CN105349408, 24 Feb 2016.

Lang and Zhang, 2010
Lang, X., & Zhang, T. (2010). Automatic chain-type solid-state fermentation reaction device and method of automatic solid-state fermentation thereof. Chinese Patent Application CN101717716, 02 Jun 2010.

Lenz and Hölker, 2004
J. Lenz, U. Hölker
Trickle-film processing: An alternative for producing fungal enzymes
BioForum Europe, 6 (2004), pp. 55-57

Li, 2009
Li, J. (2009). Method for brewing vinegar by solid and liquid combination fermentation. Chinese Patent Application CN101451101, 10 Jun. 2009.

Lim et al., 1999
Lim, B. G., Ng, T. L., Heyland, S., & Dac, T. H. (1999). Production of hydrolysate. PCT Patent Application WO9922608, 14 May 1999.

Lim et al., 2015
J.-H. Lim, E.-S. Jung, E.-K. Choi, D.-Y. Jeong, S.-W. Jo, J.-H. Jin, et al.
Supplementation with Aspergillus oryzae fermented kochujang lowers serum cholesterol in subjects with hyperlipidemia
Clinical Nutrition, 34 (2015), pp. 383-387

Liu et al., 2004
D. Liu, Y. Zhu, R. Beeftink, L. Ooijkaas, A. Rinzema, J. Chen, et al.
Chinese vinegar and its solid-state fermentation process
Food Reviews International, 20 (2004), pp. 407-424

Liu et al., 2009
Liu, X., Wu, X., Yang, L., & Zhou, Q. (2009). Low-salt liquid state fermented soy sauce production process. Chinese Patent Application CN101595972, 09 Dec 2009.

Liu et al., 2011
D. Liu, R. Zhang, X. Yang, H. Wu, D. Xu, Z. Tang, et al.
Thermostable cellulase production of Aspergillus fumigatus Z5 under solid-state
International Biodeterioration & Biodegradation, 65 (2011), pp. 717-725

Liu et al., 2016a
Y. Liu, C. Li, X. Meng, Y. Yan
Biodiesel synthesis directly catalyzed by the fermented solid of Burkholderia cenocepacia via solid state fermentation
Fuel Processing Technology, 106 (2016), pp. 303-309

Liu et al., 2016b
Liu, X., Song, J., Xia, T., Wang, M., Zhang, X., & Zheng, Y. (2016b). Health care vinegar and brewing process thereof. Chinese Patent Application CN105505732, 20 Apr 2016.

Lombard, 2001
Lombard, C. K. (2001). Process for the production of organic products from lignocellulose containing biomass sources. PCT Patent Application WO200132715, 10 May 2001.

Luke and Burton, 2001
A.K. Luke, S.G. Burton
A novel application for Neurospora crassa: Progress from batch culture to a membrane bioreactor for the bioremediation of phenols
Enzyme and Microbial Technology, 29 (6–7) (2001), pp. 348-356

Lv et al., 2015
X.-C. Lv, Q.-Q. Cai, X.-X. Ke, F. Chen, P.-F. Rao, L. Ni
Characterization of fungal community and dynamics during the traditional brewing of Wuyi Hong Qu glutinous rice wine by means of multiple culture-independent methods
Food Control, 54 (2015), pp. 231-239

Lv et al., 2013
X.-C. Lv, R.-L. Huang, F. Chen, W. Zhang, P.-F. Rao, L. Ni
Bacterial community dynamics during the traditional brewing of Wuyi Hong Qu glutinous rice wine as determined by culture-independent methods
Food Control, 34 (2013), pp. 300-306

Lueth and Wismar, 2005
Lueth, P., & Wismar, P. L. (2005). Solid state fermenter. European Patent EP1502946, 02 Feb 2005.

Madrera et al., 2015
R.R. Madrera, R.P. Bedrinana, B.S. Valles
Production and characterization of aroma compounds from apple pomace by solid-state fermentation with selected yeasts
LWT – Food Science and Technology, 64 (2015), pp. 1342-1353

Maeda et al., 2011
Y. Maeda, M. Okuda, K. Hashizume, M. Joyo, S. Mikami
Analyses of peptides in sake mash: Forming a profile of bitter-tasting peptides
Journal of Bioscience and Bioengineering, 112 (3) (2011), pp. 238-246

Mai et al., 2016
H.T.N. Mai, K.M. Lee, S.S. Choi
Enhanced oxalic acid production from corncob by a methanol-resistant strain of Aspergillus niger using semi solid-sate fermentation
Process Biochemistry, 51 (2016), pp. 9-15

Martín-Sampedro et al., 2012
R. Martín-Sampedro, M.E. Eugenio, J.C. Villar
Effect of steam explosion and enzymatic pre-treatments on pulping and bleaching of Hesperaloe funifera
Bioresource Technology, 111 (2012), pp. 460-467

Martins et al., 2011
S. Martins, S.I. Mussatto, G. Martínez-Avila, J. Montañez-Saenz, C.N. Aguilar, J.A. Teixeira
Bioactive phenolic compounds: Production and extraction by solid-state fermentation. A review
Biotechnology Advances, 29 (2011), pp. 365-373

Marui et al., 2013
J. Marui, S. Tada, M. Fukuoka, Y. Wagu, Y. Shiraishi, N. Kitamoto
Reduction of the degradation activity of umami-enhancing purinic ribonucleotide supplement in miso by the targeted suppression of acid phosphatases in the Aspergillus oryzae starter culture
International Journal of Food Microbiology, 166 (2013), pp. 238-243

Mathur et al., 2013
G. Mathur, A. Mathur, B.M. Sharma, R.S. Chauhan
Enhanced production of laccase from Coriolus sp. using Plackett-Burman design
Journal of Pharmacy Research, 6 (2013), pp. 151-154

Melikoglu et al., 2013
M. Melikoglu, C.S.K. Lin, C. Webb
Kinetic studies on the multi-enzyme solution produced via solid-state fermentation of waste bread by Aspergillus awamori
Biochemical Engineering Journal, 80 (2013), pp. 76-82

Mendonça et al., 2002
R. Mendonça, A. Guerra, A. Ferraz
Delignification of Pinus taeda wood chips treated with Ceriporiopsis subvermispora for preparing high-yield kraft pulps
Journal of Chemical Technology and Biotechnology, 77 (2002), pp. 411-418

Meza et al., 2007
J.C. Meza, R. Auria, A. Lomascolo, J.-C. Sigoillot, L. Casalot
Role of ethanol on growth, laccase production and protease activity in Pycnoporus cinnabarinus ss3
Enzyme and Microbial Technology, 41 (2007), pp. 162-168

Moy et al., 2012
Y.-S. Moy, T.-J. Lu, C.-C. Chou
Volatile components of the enzyme-ripened sufu, a Chinese traditional fermented product of soy bean
Journal of Bioscience and Bioengineering, 113 (2) (2012), pp. 196-201

Nagar et al., 2011
S. Nagar, A. Mittal, D. Kumar, L. Kumar, R.C. Kuhad, V.K. Gupta
Hyper production of alkali stable xylanase in lesser duration by Bacillus pumilus SV-85S using wheat bran under solid state fermentation
New Biotechnology, 28 (2011), pp. 581-587

Ncube et al., 2012
T. Ncube, R.L. Howard, E.K. Abotsi, E.L. Jansen van Rensburg, I. Ncube
Jatropha curcas seed cake as substrate for production of xylanase and cellulase by Aspergillus niger FGSCA733 in solid-state fermentation
Industrial Crops and Products, 37 (2012), pp. 118-123

OECD, 2009
OECD
Patent statistics manual
(second edition), Organisation for Economic Co-operation and Development (OECD) (2009)

Ohata et al., 2016
M. Ohata, S. Uchida, L. Zhou, K. Arihara
Antioxidant activity of fermented meat sauce and isolation of an associated antioxidant peptide
Food Chemistry, 194 (2016), pp. 1034-1039

Okutsu et al., 2015
K. Okutsu, Y. Yoshizaki, N. Ikeda, T. Kusano, F. Hashimoto, K. Takamine
Antioxidants in heat-processed koji and the production mechanisms
Food Chemistry, 187 (2015), pp. 364-369

Okutsu et al., 2012
K. Okutsu, Y. Yoshizaki, K. Takamine, H. Tamaki, K. Ito, Y. Sameshima
Development of a heat-processing method for koji to enhance its antioxidant activity
Journal of Bioscience and Bioengineering, 113 (3) (2012), pp. 349-354

Orozco et al., 2008
A.L. Orozco, M.I. Pérez, O. Guevara, J. Rodríguez, M. Hernández, F.J. González-Vila, et al.
Biotechnological enhancement of coffee pulp residues by solid-state fermentation with Streptomyces. Py–GC/MS analysis
Journal of Analytical and Applied Pyrolysis, 81 (2008), pp. 247-252

Ozturkoglu-Budak et al., 2016
S. Ozturkoglu-Budak, A. Wiebenga, P.A. Bron, R.P. de Vries
Protease and lipase activities of fungal and bacterial strains derived froman artisanal raw ewe's milk cheese
International Journal of Food Microbiology, 237 (2016), pp. 17-27

Pandey, 2003
A. Pandey
Solid-state fermentation
Biochemical Engineering Journal, 13 (2003), pp. 81-84

Pandey et al., 2016
A.K. Pandey, G. Edgard, S. Negi
Optimization of concomitant production of cellulase and xylanase from Rhizopus oryzae SN5 through EVOP-factorial design technique and application in Sorghum Stover based bioethanol production
Renewable Energy, 98 (2016), pp. 51-56

Panwar et al., 2014
D. Panwar, P.K. Srivastava, M. Kapoor
Production, extraction and characterization of alkaline xylanase from Bacillus sp. PKD-9 with potential for poultry feed
Biocatalysis and Agricultural Biotechnology, 3 (2014), pp. 118-125

Pirota et al., 2013
R.D.P.B. Pirota, M. Tonelotto, P.S. Delabona, R.F. Fonseca, D.A.A. Paixão, F.C.F. Baleeiro, et al.
Enhancing xylanases production by a new Amazon Forest strain of Aspergillus oryzae using solid-state fermentation under controlled operation conditions
Industrial Crops and Products, 45 (2013), pp. 465-471

Qureshi et al., 2016
A.S. Qureshi, I. Khushk, C.H. Ali, Y. Chisti, A. Ahmad, H. Majeed
Coproduction of protease and amylase by thermophilic Bacillus sp. BBXS-2 using open solid-state fermentation of lignocellulosic biomass
Biocatalysis and Agricultural Biotechnology, 8 (2016), pp. 146-151

Raimbault and Germon, 1976
Raimbault, M., & Germon, J. C. (1976). Procédé d’enrichissement en protéines de produits comestibles solides, French Patent No. 76-06-677.

Rastogi et al., 2016
S. Rastogi, R. Soni, J. Kaur, S.K. Soni
Unravelling the capability of Pyrenophora phaeocomes S-1 for the production of ligno-hemicellulolytic enzyme cocktail and simultaneous bio-delignification of rice straw for enhanced enzymatic saccharification
Bioresource Technology, 222 (2016), pp. 458-469

Ravikumar et al., 2012
G. Ravikumar, D. Gomathi, M. Kalaiselvi, C. Uma
A protease from the medicinal mushroom Pleurotus sajor-caju: Production, purification and partial characterization
Asian Pacific Journal of Tropical Biomedicine (2012), pp. S411-S417

Riker, 1962
Riker Laboratories Inc. (1962). Production of pyrogen-free penicillinase. British Patent GB887408, 17 Jan 1962.

Rodríguez-Couto and Toca-Herrera, 2006
S. Rodríguez-Couto, J.L. Toca-Herrera
Industrial and biotechnological applications of laccases: A review
Biotechnology Advances, 24 (5) (2006), pp. 500-513

Rodríguez-Fernández et al., 2011
D.E. Rodríguez-Fernández, J.A. Rodríguez-León, J.C. Carvalho, W. Sturm, C.R. Soccol
The behavior of kinetic parameters in production of pectinase and xylanase by solid-state fermentation
Bioresource Technology, 102 (2011), pp. 10657-10662

Ropars et al., 2015
J. Ropars, R.C.R. de la Vega, M. López-Villavicencio, J. Gouzy, E. Sallet, E. Dumas, et al.
Adaptive horizontal gene transfers between multiple cheese-associated fungi
Current Biology, 25 (2015), pp. 2562-2569

Sahnoun et al., 2015
M. Sahnoun, M. Kriaa, F. Elgharbi, D.-Z. Ayadi, S. Bejar, R. Kammoun
Aspergillus oryzae S2 alpha-amylase production under solid state fermentation: Optimization of culture conditions
International Journal of Biological Macromolecules, 75 (2015), pp. 73-80

Salar et al., 2016
R.K. Salar, S.S. Purewal, M.S. Bhatti
Optimization of extraction conditions and enhancement of phenolic content and antioxidant activity of pearl millet fermented with Aspergillus awamori MTCC-548
Resource-Efficient Technologies, 2 (2016), pp. 148-157

Sethi et al., 2016
B.K. Sethi, A. Jana, P.K. Nanda, P.K.D. Mohapatrac, S.L. Sahoo
Thermostable acidic protease production in Aspergillus terreus NCFT 4269.10 using chickling vetch peels
Journal of Taibah University for Science, 10 (2016), pp. 571-583

Sicard et al., 2011
M. Sicard, C. Baudrit, M.N. Leclerc-Perlat, P.H. Wuillemin, N. Perrot
Expert knowledge integration to model complex food processes. Application on the Camembert cheese ripening process
Expert Systems with Applications, 38 (2011), pp. 11804-11812

Sicard et al., 2012
M. Sicard, N. Perrot, R. Reuillon, S. Mesmoudi, I. Alvarez, S. Martin
A viability approach to control food processes: Application to a Camembert cheese ripening process
Food Control, 23 (2012), pp. 312-319

Singh and Gupta, 2014
S. Singh, A. Gupta
Comparative fermentation studies on amylase production by Aspergillus flavus TF-8 using Sal (Shorea robusta) deoiled cake as natural substrate: Characterization for potential application in detergency
Industrial Crops and Products, 57 (2014), pp. 158-165

Singh et al., 2014
M.K. Singh, J. Singh, M. Kumar, I.S. Thakur
Novel lipase from basidiomycetes Schizophyllum commune ISTL04, produced by solid state fermentation of Leucaena leucocephala seeds
Journal of Molecular Catalysis B: Enzymatic, 110 (2014), pp. 92-99

Singhania et al., 2009
R.R. Singhania, A.K. Patel, C.R. Soccol, A. Pandey
Recent advances in solid-state fermentation
Biochemical Engineering Journal, 44 (2009), pp. 13-18

Sobol and Sobol, 2003
Sobol, C. V., & Sobol, Y. T. (2003). Composition and method for producing and use of a fermented hydrolyzed medium containing microorganisms and products of their metabolism. US Patent Application US2003235559, 25 Dec 2003.

Spier et al., 2011
M.R. Spier, L.P.S. Vandenberghe, A.B.P. Medeiros, C.R. Soccol
Application of different types of bioreactors in bioprocesses
P.G. Antolli, Z. Liu (Eds.), Bioreactors: Design, properties and applications, Nova Science Publishers, New York (2011), pp. 53-88

Soccol and Vandenberghe, 2003
C.R. Soccol, L.P.S. Vandenberghe
Overview of solid-state fermentation in Brazil
Biochemical Engineering Journal, 13 (2003), pp. 205-218

Sun, 2007
Sun, B. (2007). Cereals nutrient wine and its production. Chinese Patent Application CN1982430, 20 Jun 2007.

Suzuki et al., 2016
N. Suzuki, T. Ito, K. Hiroshima, T. Tokiwano, K. Hashizume
Formation of ethyl ferulate from feruloylated oligosaccharide by transesterification of rice koji enzyme under sake mash conditions
Journal of Bioscience and Bioengineering, 121 (3) (2016), pp. 281-285

Suryanarayan et al., 2000
Suryanarayan, S., Mazumdar, K., & Mazumdar, K. C. (2000). Solid state fermentation. PCT Patent Application WO200029544, 25 May 2000.

Srianta et al., 2016
I. Srianta, E. Zubaidah, T. Estiasih, M. Yamada, Harijono
Comparison of Monascus purpureus growth, pigment production and composition on different cereal substrates with solid state fermentation
Biocatalysis and Agricultural Biotechnology, 7 (2016), pp. 181-186

Takashita et al., 2013
H. Takashita, E. Fujihara, M. furutera, Y. Kajiwara, M.M. Shimoda, T. Ogawa, et al.
Competitive advantage and tolerance of selected shochu yeast in barley shochu mash
Journal of Bioscience and Bioengineering, 116 (1) (2013), pp. 79-84

Tanaka et al., 2012
Y. Tanaka, J. Watanabe, Y. Mogi
Monitoring of the microbial communities involved in the soy sauce manufacturing process by PCR-denaturing gradient gel electrophoresis
Food Microbiology, 31 (2012), pp. 100-106

Thanapimmetha et al., 2012
A. Thanapimmetha, A. Luadsongkram, B. Titapiwatanakun, P. Srinophakun
Value added waste of Jatropha curcas residue: Optimization of protease production in solid state fermentation by Taguchi DOE methodology
Industrial Crops and Products, 37 (2012), pp. 1-5

Thomas et al., 2013
L. Thomas, C. Larroche, A. Pandey
Current developments in solid-state fermentation
Biochemical Engineering Journal, 81 (2013), pp. 146-161

Trontel et al., 2011
A. Trontel, A. Batu, I. Gusi, A. Slavica, B. Santek, S. Novak
Production of d- and l-lactic acid by mono- and mixed cultures of Lactobacillus sp
Food Technology and Biotechnology, 49 (2011), pp. 75-82

Veerabhadrappa et al., 2014
M.B. Veerabhadrappa, S.B. Shivakumar, S. Devappa
Solid-state fermentation of Jatropha seed cake for optimization of lipase, protease and detoxification of anti-nutrients in Jatropha seed cake using Aspergillus versicolor CJS-98
Journal of Bioscience and Bioengineering, 117 (2014), pp. 208-214

Velmurugan et al., 2011
P. Velmurugan, H. Hur, V. Balachandar, S. Kamala-Kannan, K.J. Lee, S.M. Lee, et al.
Monascus pigment production by solid-state fermentation with corn cob substrate
Journal of Bioscience and Bioengineering, 112 (2011), pp. 590-594

Vlasenko et al., 2005
Vlasenko, E., Cherry, J., & Xu, F. (2005). Methods for degrading lignocellulosic materials. US Patent Application US2005164355, 28 Jul. 2005.

Voigt et al., 2011
D.D. Voigt, M.F. Patterson, M. Linton, A.L. Kelly
Effect of high-pressure treatment of milk prior to manufacture on ripening of Camembert cheese
Innovative Food Science and Emerging Technologies, 12 (2011), pp. 1-5

Wang et al., 2006
Wang, F., Gao, B., & Yao, R. (2006). Cluster sprinkling fermentation method for preparing fruit vinegar in liquid and solid states and fermentation equipment. Chinese Patent Application CN1661001, 31 Aug 2006.

Watanabe et al., 2011
J. Watanabe, H. Tanaka, Y. Mogi, T. Yamazaki, K. Suzuki, T. Watanabe, et al.
Loss of Aspergillus oryzae amyR function indirectly affects hemicellulolytic and cellulolytic enzyme production
Journal of Bioscience and Bioengineering, 11 (4) (2011), pp. 408-413

Wei, 2001
X. Wei
A milestone of condiments administration with industrial standard
Chinese Condiment, 1 (2001), pp. 3-8

Wei et al., 2013
C.-L. Wei, S.-H. Chao, W.-B. Tsai, P.-S. Lee, N.-H. Tsau, J.-S. Chen, et al.
Analysis of bacterial diversity during the fermentation of inyu, a high-temperature fermented soy sauce, using nested PCR-denaturing gradient gel electrophoresis and the plate count method
Food Microbiology, 33 (2013), pp. 252-261

WIPO, 2016
WIPO
International Patent Classification Version 2016: Guide to the IPC
(2016)

WTO, 1994
WTO
Agreement on Trade-Related Aspects of Intellectual Property Rights (TRIPS)
World Trade Organization (WTO), Marrakesh (1994)

Yamada et al., 2011
O. Yamada, R. Takara, R. Hamada, R. Hayashi, M. Tsukahara, S. Mikami
Molecular biological researches of Kuro-Koji molds, their classification and safety
Journal of Bioscience and Bioengineering, 112 (3) (2011), pp. 233-237

Yan et al., 2013
Y.-Z. Yan, Y.-L. Qian, F.-D. Ji, J.-Y. Chen, B.-Z. Han
Microbial composition during Chinese soy sauce koji-making based on culture dependent and independent methods
Food Microbiology, 34 (2013), pp. 189-195

Yazid et al., 2016
N.A. Yazid, R. Barrena, A. Sánchez
Assessment of protease activity in hydrolysed extracts from SSF of hair waste by and indigenous consortium of microorganisms
Waste Management, 49 (2016), pp. 420-426

Yong et al., 2011
X. Yong, W. Raza, G. Yu, W. Ran, Q. Shen, X. Yang
Optimization of the production of poly-gamma-glutamic acid by Bacillus amyloliquefaciens C1 in solid-state fermentation using dairy manure compost and monosodium glutamate production residues as basic substrates
Bioresource Technology, 102 (2011), pp. 7548-7554

Yoon et al., 2014
L.W. Yoon, T.N. Ang, G.C. Ngoh, A.S.M. Chua
Fungal solid-state fermentation and various methods of enhancement in cellulase production
Biomass and Bioenergy, 67 (2014), pp. 319-338

Yu, 2011
Yu, J. (2011). Soy sauce without preservative. Chinese Patent Application CN102090614, 15 Jun 2011.

Zhang et al., 2015
B. Zhang, Z.-B. Guan, Y. Cao, G.-F. Xie, J. Lu
Secretome of Aspergillus oryzae in Shaoxing rice wine koji
International Journal of Food Microbiology, 155 (2015), pp. 113-119

Zhang et al., 2016
L. Zhang, H. Zhang, Z. Wang, G. Chen, L. Wang
Dynamic changes of the dominant functioning microbial community in the compost of a 90-m3 aerobic solid state fermentor revealed by integrated meta-omics
Bioresource Technology, 203 (2016), pp. 1-10

Zheng et al., 2014
X.W. Zheng, Z. Yan, M.J.R. Nout, E.J.S. Smid, M.H. Zwietering, T. Boekhout, et al.
Microbiota dynamics related to environmental conditions during the fermentative production of Fen-Daqu, a Chinese industrial fermentation starter
International Journal of Food Microbiology, 182–183 (2014), pp. 57-62

Zhu and Tramper, 2013
Y. Zhu, J. Tramper
Koji – Where East meets West in fermentation
Biotechnology Advances, 31 (2013), pp. 1448-1457